Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | EZ449_02190 | Not Available | Positive | 509938 - 510780 | 29922.1 |
| hypothetical protein | EZ449_02195 | Not Available | Positive | 510810 - 511496 | 25595.5 |
| tail-specific protease | EZ449_02200 | Not Available | Positive | 511711 - 513900 | 81062.1 |
| spfh domain-containing protein | EZ449_02205 | Not Available | Negative | 514105 - 515037 | 34778.2 |
| hypothetical protein | EZ449_02210 | Not Available | Positive | 515152 - 515337 | 6656.3 |
| hypothetical protein | EZ449_02215 | Not Available | Negative | 515440 - 515625 | 6702.58 |
| capa family protein | EZ449_02220 | Not Available | Negative | 515670 - 516767 | 40134.1 |
| glycoside hydrolase | EZ449_02225 | Not Available | Negative | 516867 - 517424 | 20978.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EZ449_02230 | Not Available | Positive | 518541 - 519536 | 37014.3 |
| pyruvate dehydrogenase | EZ449_02235 | Not Available | Positive | 519568 - 521271 | 59283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

