Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1/p1 nuclease | EZ449_02140 | Not Available | Positive | 500957 - 501763 | 30571.9 |
| hypothetical protein | EZ449_02145 | Not Available | Positive | 501856 - 502290 | 15939.9 |
| low molecular weight phosphotyrosine protein phosphatase | EZ449_02150 | Not Available | Positive | 502293 - 502727 | 16468.7 |
| thua domain-containing protein | EZ449_02155 | Not Available | Positive | 502785 - 503555 | 29185.6 |
| hypothetical protein | EZ449_02160 | Not Available | Negative | 503618 - 504022 | 13736.0 |
| hypothetical protein | EZ449_02165 | Not Available | Negative | 504081 - 504755 | 25984.2 |
| duf1543 domain-containing protein | EZ449_02170 | Not Available | Positive | 504879 - 505439 | 21321.7 |
| pa2169 family four-helix-bundle protein | EZ449_02175 | Not Available | Positive | 505549 - 506004 | 16933.8 |
| cyanophycin synthetase | EZ449_02180 | Not Available | Negative | 506082 - 508697 | 96319.9 |
| cyanophycinase | EZ449_02185 | Not Available | Positive | 508992 - 509867 | 31496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

