Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter frigidisoli strain RP-3-11
Accession NumberSJSN00000000.1
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | EZ449_22510 | Not Available | + | 5268501 - 5268808 | 12381.1 |
| is1634 family transposase | EZ449_22515 | Not Available | + | 5268811 - 5270034 | 46983.8 |
| Trna-ala | Not Available | Not Available | + | 5270638 - 5270714 | Not Available |
| Trna-ile | Not Available | Not Available | + | 5270731 - 5270805 | Not Available |
| hypothetical protein | EZ449_22540 | Not Available | - | 5271260 - 5271488 | 8635.61 |
| hypothetical protein | EZ449_22545 | Not Available | + | 5272196 - 5272424 | 8635.61 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EZ449_22550 | Not Available | - | 5272866 - 5273276 | 15136.1 |
| atp-binding protein | EZ449_22555 | Not Available | - | 5273368 - 5273566 | 7492.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.