Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_22450 | Not Available | Negative | 5259372 - 5259992 | 24092.7 |
| hypothetical protein | EZ449_22455 | Not Available | Negative | 5260168 - 5260545 | 14674.0 |
| transposase | EZ449_22460 | Not Available | Negative | 5260552 - 5260819 | 10236.3 |
| orf6n domain-containing protein | EZ449_22470 | Not Available | Positive | 5262326 - 5262750 | 16479.3 |
| hypothetical protein | EZ449_22475 | Not Available | Negative | 5262751 - 5262979 | 8609.51 |
| hypothetical protein | EZ449_22480 | Not Available | Positive | 5263358 - 5263795 | 16749.6 |
| hypothetical protein | EZ449_22485 | Not Available | Positive | 5264414 - 5264643 | 8706.69 |
| type ii/iv secretion system protein | EZ449_22490 | Not Available | Negative | 5264644 - 5265775 | 42453.5 |
| is66 family insertion sequence hypothetical protein | EZ449_22500 | Not Available | Positive | 5267588 - 5267866 | 10394.8 |
| transposase | EZ449_22505 | Not Available | Positive | 5267869 - 5268207 | 12658.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

