Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenylcysteine carboxylmethyltransferase family protein | EZ449_22395 | Not Available | Negative | 5252057 - 5252779 | 27787.0 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | EZ449_22400 | Not Available | Negative | 5252781 - 5253536 | 28789.1 |
| hypothetical protein | EZ449_22410 | Not Available | Negative | 5254188 - 5254523 | 12974.5 |
| is66 family insertion sequence hypothetical protein | EZ449_22415 | Not Available | Positive | 5254601 - 5254879 | 10426.7 |
| transposase | EZ449_22420 | Not Available | Positive | 5254882 - 5255220 | 12611.3 |
| is66 family transposase | EZ449_22425 | Not Available | Positive | 5255271 - 5256806 | 58240.2 |
| hypothetical protein | EZ449_22430 | Not Available | Negative | 5256835 - 5257063 | 8609.51 |
| hypothetical protein | EZ449_22435 | Not Available | Positive | 5257214 - 5257642 | 16202.6 |
| hypothetical protein | EZ449_22440 | Not Available | Positive | 5257804 - 5258499 | 27373.3 |
| transposase | EZ449_22445 | Not Available | Negative | 5258593 - 5258860 | 10236.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

