Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EZ449_22335 | Not Available | Positive | 5239636 - 5240265 | 23911.9 |
| transposase | EZ449_22340 | Not Available | Positive | 5240498 - 5240964 | 18009.5 |
| atp-binding protein | EZ449_22350 | Not Available | Positive | 5243943 - 5244125 | 6759.96 |
| hypothetical protein | EZ449_22355 | Not Available | Positive | 5244443 - 5244649 | 7637.87 |
| duf4236 domain-containing protein | EZ449_22360 | Not Available | Positive | 5244867 - 5245976 | 42084.4 |
| hypothetical protein | EZ449_22365 | Not Available | Positive | 5246036 - 5246401 | 14215.0 |
| beta-carotene 15,15'-monooxygenase | EZ449_22370 | Not Available | Positive | 5246432 - 5246787 | 13604.9 |
| atp-binding protein | EZ449_22380 | Not Available | Positive | 5248632 - 5249363 | 27522.2 |
| atp-binding protein | EZ449_22385 | Not Available | Negative | 5249577 - 5250326 | 28808.0 |
| is21 family transposase | EZ449_22390 | Not Available | Negative | 5250330 - 5251898 | 60362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

