Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EZ449_02090 | Not Available | Positive | 491772 - 492332 | 21908.3 |
| hypothetical protein | EZ449_02095 | Not Available | Positive | 492409 - 492870 | 17529.6 |
| hypothetical protein | EZ449_02100 | Not Available | Positive | 493056 - 494312 | 45144.8 |
| tlpa family protein disulfide reductase | EZ449_02105 | Not Available | Positive | 494431 - 494781 | 13398.3 |
| hypothetical protein | EZ449_02110 | Not Available | Negative | 495161 - 496051 | 34023.5 |
| mfs transporter | EZ449_02115 | Not Available | Positive | 496187 - 497710 | 55708.0 |
| hypothetical protein | EZ449_02120 | Not Available | Positive | 497722 - 497970 | 9349.81 |
| class ii fumarate hydratase | EZ449_02125 | Not Available | Positive | 498321 - 499718 | 49782.9 |
| hypothetical protein | EZ449_02130 | Not Available | Positive | 500046 - 500399 | 12974.1 |
| fumarate hydratase | EZ449_02135 | Not Available | Positive | 500434 - 500955 | 20039.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

