Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_22285 | Not Available | Negative | 5232054 - 5232275 | 8629.32 |
| is21 family transposase | EZ449_22290 | Not Available | Positive | 5232508 - 5234073 | 60589.1 |
| atp-binding protein | EZ449_22295 | Not Available | Positive | 5234077 - 5234793 | 27350.0 |
| hypothetical protein | EZ449_22300 | Not Available | Negative | 5234844 - 5235308 | 17598.0 |
| hypothetical protein | EZ449_22305 | Not Available | Negative | 5235299 - 5235622 | 12192.9 |
| hypothetical protein | EZ449_22310 | Not Available | Negative | 5236680 - 5236908 | 8635.61 |
| mfs transporter | EZ449_22315 | Not Available | Negative | 5237011 - 5238243 | 44569.4 |
| coproporphyrinogen iii oxidase | EZ449_22320 | Not Available | Negative | 5238346 - 5238555 | 7248.8 |
| phosphoribosylpyrophosphate synthetase | EZ449_22325 | Not Available | Negative | 5238752 - 5239060 | 11400.3 |
| duf4442 domain-containing protein | EZ449_22330 | Not Available | Positive | 5239141 - 5239626 | 18826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

