Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | EZ449_22235 | Not Available | Negative | 5218324 - 5218632 | 11515.8 |
| peroxiredoxin | EZ449_22240 | Not Available | Negative | 5218647 - 5219279 | 23486.5 |
| s9 family peptidase | EZ449_22245 | Not Available | Negative | 5220290 - 5222575 | 85646.4 |
| atp-binding protein | EZ449_22250 | Not Available | Positive | 5223106 - 5223287 | 6644.87 |
| dna repair protein | EZ449_22255 | Not Available | Negative | 5223593 - 5224054 | 17371.1 |
| restriction endonuclease | EZ449_22260 | Not Available | Negative | 5224293 - 5225066 | 29859.5 |
| atp-binding protein | EZ449_22265 | Not Available | Negative | 5225075 - 5227135 | 79820.9 |
| aaa family atpase | EZ449_22270 | Not Available | Negative | 5227282 - 5229738 | 95151.6 |
| rna-directed dna polymerase | EZ449_22275 | Not Available | Negative | 5230233 - 5231189 | 37715.5 |
| transposase | EZ449_22280 | Not Available | Negative | 5231218 - 5231485 | 10178.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

