Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_22120 | Not Available | Negative | 5191728 - 5192636 | 34892.8 |
| cupin domain-containing protein | EZ449_22125 | Not Available | Positive | 5192768 - 5193271 | 18630.6 |
| hypothetical protein | EZ449_22130 | Not Available | Negative | 5193357 - 5193566 | 7975.76 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EZ449_22135 | Not Available | Negative | 5194018 - 5194434 | 15490.6 |
| hypothetical protein | EZ449_22140 | Not Available | Negative | 5194910 - 5195446 | 20744.0 |
| rhs repeat-associated core domain-containing protein | EZ449_22145 | Not Available | Negative | 5195406 - 5198702 | 121357.0 |
| hypothetical protein | EZ449_22150 | Not Available | Negative | 5198865 - 5203160 | 158998.0 |
| cyclic nucleotide-binding domain-containing protein | EZ449_22155 | Not Available | Positive | 5203686 - 5204096 | 15741.3 |
| type ii/iv secretion system protein | EZ449_22160 | Not Available | Negative | 5204564 - 5205152 | 21631.5 |
| fic family protein | EZ449_22165 | Not Available | Positive | 5206057 - 5207553 | 58009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

