Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | EZ449_22070 | Not Available | Negative | 5179061 - 5180428 | 51173.9 |
| is110 family transposase | EZ449_22075 | Not Available | Negative | 5180684 - 5181658 | 36389.9 |
| hypothetical protein | EZ449_22080 | Not Available | Negative | 5182474 - 5182839 | 13661.4 |
| tonb-dependent receptor | EZ449_22085 | Not Available | Negative | 5182982 - 5185435 | 91643.7 |
| pspc domain-containing protein | EZ449_22090 | Not Available | Negative | 5185509 - 5187245 | 65694.9 |
| padr family transcriptional regulator | EZ449_22095 | Not Available | Negative | 5187259 - 5187594 | 12416.0 |
| hypothetical protein | EZ449_22100 | Not Available | Positive | 5187751 - 5187999 | 9024.21 |
| amino acid permease | EZ449_22105 | Not Available | Positive | 5188255 - 5189712 | 52066.9 |
| nad(p)/fad-dependent oxidoreductase | EZ449_22110 | Not Available | Negative | 5190098 - 5190994 | 32911.6 |
| methyltransferase domain-containing protein | EZ449_22115 | Not Available | Negative | 5191061 - 5191687 | 24290.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

