Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_22020 | Not Available | Negative | 5168557 - 5169186 | 24207.0 |
| hypothetical protein | EZ449_22025 | Not Available | Negative | 5169316 - 5169501 | 6965.6 |
| hypothetical protein | EZ449_22030 | Not Available | Negative | 5170357 - 5170884 | 19778.1 |
| sgcj/ecac family oxidoreductase | EZ449_22035 | Not Available | Negative | 5171354 - 5171839 | 18981.8 |
| crp/fnr family transcriptional regulator | EZ449_22040 | Not Available | Positive | 5173372 - 5173953 | 22472.1 |
| bile acid 7-alpha dehydratase | EZ449_22045 | Not Available | Positive | 5174528 - 5175145 | 23309.0 |
| amidohydrolase | EZ449_22050 | Not Available | Positive | 5175161 - 5176174 | 37794.3 |
| alpha/beta hydrolase | EZ449_22055 | Not Available | Positive | 5176194 - 5177036 | 31149.3 |
| helix-turn-helix domain-containing protein | EZ449_22060 | Not Available | Positive | 5177580 - 5178398 | 32527.4 |
| hypothetical protein | EZ449_22065 | Not Available | Negative | 5178472 - 5179074 | 23333.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

