Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EZ449_21865 | Not Available | Positive | 5140374 - 5140892 | 19187.3 |
| arac family transcriptional regulator | EZ449_21870 | Not Available | Positive | 5141230 - 5142129 | 34624.8 |
| crp/fnr family transcriptional regulator | EZ449_21875 | Not Available | Positive | 5142551 - 5143120 | 21961.4 |
| sdr family oxidoreductase | EZ449_21880 | Not Available | Positive | 5143219 - 5144061 | 29993.8 |
| hypothetical protein | EZ449_21885 | Not Available | Positive | 5144211 - 5144399 | 6873.23 |
| crp/fnr family transcriptional regulator | EZ449_21890 | Not Available | Negative | 5144869 - 5145438 | 22341.0 |
| haloalkane dehalogenase | EZ449_21895 | Not Available | Negative | 5145543 - 5146418 | 33621.4 |
| arac family transcriptional regulator | EZ449_21900 | Not Available | Negative | 5146862 - 5147803 | 35990.2 |
| duf1330 domain-containing protein | EZ449_21905 | Not Available | Negative | 5148142 - 5148564 | 15785.8 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_21910 | Not Available | Positive | 5149028 - 5149867 | 30243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

