Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | EZ449_21810 | Not Available | Negative | 5114502 - 5114999 | 18290.1 |
| dna mismatch repair protein muts | EZ449_21815 | Not Available | Negative | 5115131 - 5117743 | 98148.7 |
| duf11 domain-containing protein | EZ449_21820 | Not Available | Positive | 5118330 - 5132723 | 487570.0 |
| type ix secretion system membrane protein porp/sprf | EZ449_21825 | Not Available | Positive | 5132737 - 5133708 | 35459.6 |
| response regulator transcription factor | EZ449_21830 | Not Available | Positive | 5133820 - 5134467 | 23799.0 |
| hypothetical protein | EZ449_21835 | Not Available | Negative | 5134487 - 5134675 | 6485.22 |
| cytochrome c oxidase subunit i | EZ449_21845 | Not Available | Negative | 5136006 - 5136709 | 25645.4 |
| duf1016 family protein | EZ449_21850 | Not Available | Positive | 5137129 - 5137320 | 7235.76 |
| sdr family oxidoreductase | EZ449_21855 | Not Available | Negative | 5137619 - 5138446 | 29617.5 |
| arac family transcriptional regulator | EZ449_21860 | Not Available | Negative | 5138543 - 5139433 | 34385.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

