Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | EZ449_02040 | Not Available | Positive | 483612 - 484391 | 27737.6 |
| sigma-54-dependent fis family transcriptional regulator | EZ449_02045 | Not Available | Positive | 484556 - 485974 | 53191.8 |
| ai-2e family transporter | EZ449_02050 | Not Available | Positive | 486038 - 487087 | 39063.4 |
| ytxh domain-containing protein | EZ449_02055 | Not Available | Positive | 487161 - 487427 | 9351.01 |
| phage holin family protein | EZ449_02060 | Not Available | Positive | 487482 - 487859 | 14064.2 |
| hypothetical protein | EZ449_02065 | Not Available | Positive | 487846 - 488280 | 16280.0 |
| aspartate--trna ligase | EZ449_02070 | Not Available | Negative | 488413 - 490158 | 66164.2 |
| type ii toxin-antitoxin system higb family toxin | EZ449_02075 | Not Available | Positive | 490291 - 490620 | 12752.5 |
| hypothetical protein | EZ449_02080 | Not Available | Positive | 490623 - 490979 | 13538.5 |
| hypothetical protein | EZ449_02085 | Not Available | Negative | 490982 - 491386 | 15845.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

