Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | EZ449_21760 | Not Available | Negative | 5105990 - 5106478 | 18040.6 |
| duf3291 domain-containing protein | EZ449_21765 | Not Available | Positive | 5106595 - 5107275 | 26329.6 |
| hypothetical protein | EZ449_21770 | Not Available | Positive | 5107322 - 5107573 | 9722.73 |
| vut family protein | EZ449_21775 | Not Available | Negative | 5108016 - 5108786 | 28719.8 |
| bcr/cfla family efflux mfs transporter | EZ449_21780 | Not Available | Positive | 5108948 - 5110174 | 43947.0 |
| arac family transcriptional regulator | EZ449_21785 | Not Available | Positive | 5110333 - 5111244 | 35403.9 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_21790 | Not Available | Positive | 5111327 - 5112160 | 29397.3 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_21795 | Not Available | Positive | 5112282 - 5113127 | 30156.6 |
| thioredoxin family protein | EZ449_21800 | Not Available | Negative | 5113288 - 5113893 | 21885.1 |
| tlpa family protein disulfide reductase | EZ449_21805 | Not Available | Negative | 5113900 - 5114367 | 18195.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

