Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | EZ449_21705 | Not Available | Positive | 5097256 - 5097657 | 15547.8 |
| mate family efflux transporter | EZ449_21715 | Not Available | Positive | 5098222 - 5099595 | 49950.7 |
| hypothetical protein | EZ449_21720 | Not Available | Negative | 5099620 - 5100354 | 27174.5 |
| hypothetical protein | EZ449_21725 | Not Available | Negative | 5100404 - 5100982 | 21982.3 |
| pseudouridylate synthase | EZ449_21730 | Not Available | Negative | 5101004 - 5101690 | 26418.9 |
| histone deacetylase | EZ449_21735 | Not Available | Negative | 5101707 - 5102609 | 33800.3 |
| hypothetical protein | EZ449_21740 | Not Available | Negative | 5102610 - 5103470 | 33131.5 |
| kynureninase | EZ449_21745 | Not Available | Negative | 5103477 - 5104772 | 48892.4 |
| pyridoxamine 5'-phosphate oxidase | EZ449_21750 | Not Available | Negative | 5104840 - 5105328 | 18341.8 |
| dna-3-methyladenine glycosylase | EZ449_21755 | Not Available | Negative | 5105382 - 5105987 | 22257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

