Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EZ449_21645 | Not Available | Positive | 5083420 - 5083983 | 21601.1 |
| pentapeptide repeat-containing protein | EZ449_21650 | Not Available | Positive | 5083991 - 5084581 | 22508.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EZ449_21655 | Not Available | Negative | 5084974 - 5087268 | 82760.4 |
| xanthine dehydrogenase family protein subunit m | EZ449_21660 | Not Available | Negative | 5087249 - 5088259 | 36834.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EZ449_21665 | Not Available | Negative | 5088290 - 5089063 | 28041.7 |
| abc transporter substrate-binding protein | EZ449_21670 | Not Available | Negative | 5089104 - 5090126 | 38669.8 |
| arac family transcriptional regulator | EZ449_21675 | Not Available | Negative | 5090136 - 5091050 | 35174.0 |
| heparan n-sulfatase | EZ449_21685 | Not Available | Positive | 5091867 - 5093288 | 53391.0 |
| non-canonical purine ntp pyrophosphatase | EZ449_21690 | Not Available | Positive | 5094510 - 5095121 | 22198.7 |
| hypothetical protein | EZ449_21695 | Not Available | Negative | 5095895 - 5096257 | 13382.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

