Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpf/raia family ribosome-associated protein | EZ449_21590 | Not Available | Negative | 5075023 - 5075337 | 11661.0 |
| wyl domain-containing protein | EZ449_21595 | Not Available | Positive | 5076045 - 5076236 | 8111.8 |
| hypothetical protein | EZ449_21600 | Not Available | Negative | 5076541 - 5076882 | 12836.0 |
| carboxymuconolactone decarboxylase family protein | EZ449_21605 | Not Available | Negative | 5077411 - 5077944 | 19553.4 |
| rida family protein | EZ449_21610 | Not Available | Negative | 5078020 - 5078454 | 16060.5 |
| multidrug efflux smr transporter | EZ449_21615 | Not Available | Negative | 5078507 - 5078836 | 11899.1 |
| rida family protein | EZ449_21620 | Not Available | Negative | 5078840 - 5079244 | 14746.9 |
| ahpc/tsa family protein | EZ449_21625 | Not Available | Negative | 5079403 - 5080101 | 24929.5 |
| is982 family transposase | EZ449_21635 | Not Available | Negative | 5082044 - 5082937 | 34308.0 |
| hypothetical protein | EZ449_21640 | Not Available | Negative | 5083107 - 5083352 | 9249.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

