Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf763 domain-containing protein | EZ449_21540 | Not Available | Negative | 5063447 - 5064649 | 44462.4 |
| metallophosphoesterase | EZ449_21545 | Not Available | Positive | 5064903 - 5066000 | 42077.0 |
| hamp domain-containing histidine kinase | EZ449_21550 | Not Available | Negative | 5065993 - 5067156 | 43377.7 |
| glycosidase | EZ449_21555 | Not Available | Positive | 5067382 - 5068854 | 56437.9 |
| aminotransferase class v-fold plp-dependent enzyme | EZ449_21560 | Not Available | Negative | 5069152 - 5070267 | 40678.9 |
| hypothetical protein | EZ449_21565 | Not Available | Positive | 5070439 - 5070885 | 15962.1 |
| aminofutalosine synthase mqne | EZ449_21570 | Not Available | Positive | 5071220 - 5072413 | 46102.0 |
| histidine phosphatase family protein | EZ449_21575 | Not Available | Positive | 5072508 - 5073131 | 24009.5 |
| radical sam protein | EZ449_21580 | Not Available | Positive | 5073345 - 5074070 | 27183.6 |
| fic family protein | EZ449_21585 | Not Available | Positive | 5074128 - 5074904 | 30375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

