Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_21485 | Not Available | Negative | 5050187 - 5050678 | 18702.6 |
| xre family transcriptional regulator | EZ449_21490 | Not Available | Positive | 5050864 - 5051085 | 8413.3 |
| atp-binding protein | EZ449_21495 | Not Available | Negative | 5051477 - 5051677 | 7639.26 |
| Trna-lys | Not Available | Not Available | Positive | 5051983 - 5052055 | Not Available |
| formylglycine-generating enzyme family protein | EZ449_21505 | Not Available | Positive | 5052237 - 5053352 | 41693.0 |
| glucose/galactose mfs transporter | EZ449_21510 | Not Available | Positive | 5053506 - 5054765 | 45496.2 |
| had family hydrolase | EZ449_21515 | Not Available | Positive | 5054865 - 5055359 | 18167.0 |
| fructose-6-phosphate aldolase | EZ449_21520 | Not Available | Negative | 5055894 - 5056553 | 23273.2 |
| glutamate synthase large subunit | EZ449_21530 | Not Available | Positive | 5057164 - 5061663 | 164803.0 |
| glutamate synthase subunit beta | EZ449_21535 | Not Available | Positive | 5061667 - 5063133 | 53676.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

