Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | EZ449_21435 | Not Available | Positive | 5039648 - 5040169 | 19541.7 |
| hypothetical protein | EZ449_21440 | Not Available | Positive | 5040315 - 5040929 | 22488.3 |
| glucose 1-dehydrogenase | EZ449_21445 | Not Available | Negative | 5041100 - 5041852 | 26136.4 |
| crp/fnr family transcriptional regulator | EZ449_21450 | Not Available | Negative | 5041944 - 5042531 | 22679.1 |
| hypothetical protein | EZ449_21455 | Not Available | Positive | 5043072 - 5043734 | 24016.4 |
| hypothetical protein | EZ449_21460 | Not Available | Negative | 5044334 - 5046400 | 76884.8 |
| hypothetical protein | EZ449_21465 | Not Available | Negative | 5047215 - 5048063 | 32016.5 |
| hypothetical protein | EZ449_21470 | Not Available | Negative | 5048050 - 5049108 | 40687.1 |
| Trna-met | Not Available | Not Available | Positive | 5049526 - 5049602 | Not Available |
| hypothetical protein | EZ449_21480 | Not Available | Negative | 5049905 - 5050183 | 10077.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

