Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EZ449_21175 | Not Available | Positive | 4981095 - 4983473 | 88081.6 |
| ftsx-like permease family protein | EZ449_21180 | Not Available | Positive | 4983614 - 4985983 | 88290.2 |
| ftsx-like permease family protein | EZ449_21185 | Not Available | Positive | 4986073 - 4988466 | 89238.7 |
| abc transporter atp-binding protein | EZ449_21190 | Not Available | Positive | 4988563 - 4989246 | 25373.6 |
| cobalamin-binding protein | EZ449_21195 | Not Available | Positive | 4989316 - 4990113 | 30546.1 |
| hypothetical protein | EZ449_21200 | Not Available | Positive | 4990238 - 4990471 | 8512.37 |
| duf3298 domain-containing protein | EZ449_21205 | Not Available | Negative | 4990474 - 4991643 | 44410.3 |
| polysaccharide deacetylase family protein | EZ449_21210 | Not Available | Negative | 4991684 - 4992547 | 33041.6 |
| polysaccharide deacetylase family protein | EZ449_21215 | Not Available | Negative | 4992633 - 4993514 | 33205.1 |
| s9 family peptidase | EZ449_21220 | Not Available | Positive | 4993690 - 4996200 | 95628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

