Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EZ449_21125 | Not Available | Positive | 4965666 - 4966937 | 49584.5 |
| atp-binding protein | EZ449_21130 | Not Available | Negative | 4967360 - 4967560 | 7639.26 |
| transposase | EZ449_21135 | Not Available | Positive | 4967561 - 4967829 | 10178.3 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | EZ449_21140 | Not Available | Negative | 4967830 - 4970067 | 85783.7 |
| pas domain-containing protein | EZ449_21145 | Not Available | Negative | 4970514 - 4971872 | 52042.3 |
| sigma-54-dependent fis family transcriptional regulator | EZ449_21150 | Not Available | Negative | 4971963 - 4973372 | 52912.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | EZ449_21155 | Not Available | Positive | 4973679 - 4974923 | 46265.3 |
| abc transporter atp-binding protein | EZ449_21160 | Not Available | Positive | 4975080 - 4975778 | 26155.5 |
| ftsx-like permease family protein | EZ449_21165 | Not Available | Positive | 4976055 - 4978424 | 88279.1 |
| abc transporter permease | EZ449_21170 | Not Available | Positive | 4978566 - 4980953 | 88757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

