Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_21025 | Not Available | Positive | 4932443 - 4932672 | 8680.59 |
| hypothetical protein | EZ449_21030 | Not Available | Positive | 4932931 - 4933119 | 6862.06 |
| hypothetical protein | EZ449_21035 | Not Available | Positive | 4933460 - 4934608 | 43003.0 |
| hypothetical protein | EZ449_21040 | Not Available | Positive | 4934611 - 4936104 | 55458.9 |
| gliding motility lipoprotein gldh | EZ449_21045 | Not Available | Positive | 4936073 - 4936564 | 18923.7 |
| tonb-dependent receptor | EZ449_21050 | Not Available | Positive | 4936743 - 4939604 | 102490.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EZ449_21055 | Not Available | Negative | 4940701 - 4941999 | 47652.6 |
| zinc carboxypeptidase | EZ449_21060 | Not Available | Positive | 4942089 - 4944584 | 93511.8 |
| susc/raga family tonb-linked outer membrane protein | EZ449_21065 | Not Available | Positive | 4944880 - 4948131 | 118014.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ449_21070 | Not Available | Positive | 4948161 - 4949597 | 51689.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

