Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EZ449_20870 | Not Available | Positive | 4895048 - 4895404 | 13609.5 |
| hypothetical protein | EZ449_20875 | Not Available | Negative | 4895406 - 4895666 | 9554.25 |
| pas domain s-box protein | EZ449_20880 | Not Available | Negative | 4895807 - 4901794 | 227840.0 |
| hypothetical protein | EZ449_20885 | Not Available | Negative | 4901839 - 4902027 | 7284.68 |
| hypothetical protein | EZ449_20890 | Not Available | Negative | 4902329 - 4902529 | 7143.8 |
| hypothetical protein | EZ449_20900 | Not Available | Negative | 4902920 - 4903240 | 12687.2 |
| hypothetical protein | EZ449_20905 | Not Available | Negative | 4903203 - 4904531 | 52894.5 |
| hepn domain-containing protein | EZ449_20910 | Not Available | Negative | 4904488 - 4905375 | 33905.9 |
| xre family transcriptional regulator | EZ449_20915 | Not Available | Positive | 4905499 - 4905861 | 13826.5 |
| hypothetical protein | EZ449_20920 | Not Available | Positive | 4906031 - 4907356 | 51411.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

