Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EZ449_20820 | Not Available | Negative | 4879222 - 4882647 | 126812.0 |
| duf4974 domain-containing protein | EZ449_20825 | Not Available | Negative | 4882781 - 4883776 | 37339.5 |
| rna polymerase sigma-70 factor | EZ449_20830 | Not Available | Negative | 4883877 - 4884443 | 22470.0 |
| hypothetical protein | EZ449_20835 | Not Available | Negative | 4884613 - 4885035 | 16653.2 |
| discoidin domain-containing protein | EZ449_20840 | Not Available | Positive | 4886435 - 4886998 | 20710.5 |
| tonb-dependent receptor | EZ449_20845 | Not Available | Positive | 4887135 - 4890347 | 116468.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_20850 | Not Available | Positive | 4890358 - 4892184 | 67672.2 |
| hypothetical protein | EZ449_20855 | Not Available | Positive | 4892242 - 4893222 | 37107.9 |
| hamp domain-containing histidine kinase | EZ449_20860 | Not Available | Positive | 4893779 - 4894015 | 8862.72 |
| orf6n domain-containing protein | EZ449_20865 | Not Available | Positive | 4894401 - 4894826 | 16520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

