Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_01940 | Not Available | Negative | 456217 - 457353 | 43320.7 |
| dipeptide epimerase | EZ449_01945 | Not Available | Positive | 457464 - 458495 | 38433.6 |
| hypothetical protein | EZ449_01950 | Not Available | Negative | 458473 - 458670 | 7494.33 |
| rhodanese-like domain-containing protein | EZ449_01955 | Not Available | Negative | 458847 - 459164 | 11882.2 |
| duf4407 domain-containing protein | EZ449_01960 | Not Available | Positive | 459394 - 460518 | 42545.0 |
| m61 family peptidase | EZ449_01965 | Not Available | Positive | 460612 - 462441 | 68267.7 |
| m20/m25/m40 family metallo-hydrolase | EZ449_01970 | Not Available | Positive | 462472 - 463779 | 47824.3 |
| carbamoyl-phosphate synthase large subunit | EZ449_01975 | Not Available | Negative | 463960 - 466797 | 104656.0 |
| carboxypeptidase regulatory-like domain-containing protein | EZ449_01980 | Not Available | Negative | 467009 - 467326 | 10994.5 |
| nadr | EZ449_01985 | Not Available | Positive | 467764 - 468294 | 20495.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

