Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 4852474 - 4852546 | Not Available |
| hypothetical protein | EZ449_20710 | Not Available | Positive | 4852720 - 4853868 | 44727.3 |
| hypothetical protein | EZ449_20715 | Not Available | Positive | 4854051 - 4854986 | 36405.5 |
| hypothetical protein | EZ449_20720 | Not Available | Positive | 4855077 - 4855337 | 10144.2 |
| helix-turn-helix domain-containing protein | EZ449_20725 | Not Available | Positive | 4855469 - 4855630 | 6403.88 |
| atp-binding protein | EZ449_20730 | Not Available | Positive | 4855631 - 4855813 | 6759.96 |
| hypothetical protein | EZ449_20740 | Not Available | Positive | 4856664 - 4856912 | 9094.82 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_20745 | Not Available | Negative | 4857043 - 4857738 | 26011.8 |
| ahpc/tsa family protein | EZ449_20750 | Not Available | Negative | 4857982 - 4859100 | 41520.1 |
| class a beta-lactamase-related serine hydrolase | EZ449_20755 | Not Available | Negative | 4859426 - 4860886 | 53708.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

