Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | EZ449_20655 | Not Available | Positive | 4839178 - 4840035 | 31770.4 |
| endonuclease | EZ449_20660 | Not Available | Positive | 4840035 - 4841144 | 42204.3 |
| nad(p)h-dependent oxidoreductase | EZ449_20665 | Not Available | Positive | 4841267 - 4841899 | 23176.0 |
| carboxypeptidase regulatory-like domain-containing protein | EZ449_20670 | Not Available | Positive | 4842794 - 4845439 | 97313.1 |
| d-glycerate dehydrogenase | EZ449_20675 | Not Available | Negative | 4845518 - 4846474 | 34811.2 |
| duf4249 domain-containing protein | EZ449_20680 | Not Available | Negative | 4846540 - 4847340 | 29581.8 |
| tonb-dependent receptor | EZ449_20685 | Not Available | Negative | 4847344 - 4849668 | 86619.0 |
| hypothetical protein | EZ449_20690 | Not Available | Negative | 4849838 - 4851037 | 44694.2 |
| gdsl family lipase | EZ449_20695 | Not Available | Negative | 4851107 - 4851778 | 25672.6 |
| hypothetical protein | EZ449_20700 | Not Available | Negative | 4851986 - 4852168 | 7005.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

