Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | EZ449_20605 | Not Available | Negative | 4827702 - 4828301 | 22394.0 |
| isopenicillin n synthase family oxygenase | EZ449_20610 | Not Available | Positive | 4828558 - 4829520 | 35999.5 |
| hypothetical protein | EZ449_20615 | Not Available | Positive | 4829680 - 4830522 | 31941.3 |
| crp/fnr family transcriptional regulator | EZ449_20620 | Not Available | Positive | 4830578 - 4831171 | 23327.2 |
| sterol desaturase family protein | EZ449_20625 | Not Available | Positive | 4831239 - 4831958 | 28386.4 |
| hypothetical protein | EZ449_20630 | Not Available | Positive | 4831995 - 4832651 | 24887.1 |
| beta-n-acetylglucosaminidase | EZ449_20635 | Not Available | Negative | 4832917 - 4834734 | 67490.6 |
| amidohydrolase | EZ449_20640 | Not Available | Negative | 4834721 - 4836355 | 60820.8 |
| dna mismatch repair endonuclease mutl | EZ449_20645 | Not Available | Positive | 4836611 - 4838449 | 68482.8 |
| rhomboid family intramembrane serine protease | EZ449_20650 | Not Available | Positive | 4838484 - 4839185 | 26188.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

