Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | EZ449_20505 | Not Available | Positive | 4799814 - 4801166 | 50688.2 |
| hypothetical protein | EZ449_20510 | Not Available | Positive | 4801276 - 4801983 | 26817.0 |
| mfs transporter | EZ449_20515 | Not Available | Negative | 4801985 - 4803196 | 43871.9 |
| dna gyrase subunit a | EZ449_20520 | Not Available | Positive | 4803412 - 4806003 | 97151.3 |
| hypothetical protein | EZ449_20525 | Not Available | Positive | 4806029 - 4807117 | 39996.9 |
| hypothetical protein | EZ449_20530 | Not Available | Positive | 4807216 - 4808361 | 42814.5 |
| hypothetical protein | EZ449_20535 | Not Available | Positive | 4808510 - 4808800 | 10852.4 |
| hypothetical protein | EZ449_20540 | Not Available | Negative | 4808836 - 4809204 | 14074.9 |
| oxygen-dependent coproporphyrinogen oxidase | EZ449_20545 | Not Available | Negative | 4809195 - 4810088 | 34863.0 |
| transposase | EZ449_20550 | Not Available | Negative | 4810318 - 4810588 | 10341.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

