Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lauroyl acyltransferase | EZ449_20455 | Not Available | Negative | 4787072 - 4787953 | 34398.4 |
| hypothetical protein | EZ449_20460 | Not Available | Positive | 4787993 - 4788604 | 24487.4 |
| magnesium/cobalt transporter cora | EZ449_20465 | Not Available | Positive | 4788711 - 4789727 | 39802.9 |
| magnesium transporter | EZ449_20470 | Not Available | Positive | 4789804 - 4791153 | 49839.9 |
| biotin synthase biob | EZ449_20475 | Not Available | Positive | 4791174 - 4792175 | 37288.6 |
| organic hydroperoxide resistance protein | EZ449_20480 | Not Available | Negative | 4792235 - 4792645 | 14326.8 |
| hypothetical protein | EZ449_20485 | Not Available | Positive | 4793055 - 4795451 | 87870.4 |
| type ix secretion system membrane protein porp/sprf | EZ449_20490 | Not Available | Positive | 4795451 - 4796446 | 37312.9 |
| hypothetical protein | EZ449_20495 | Not Available | Positive | 4796451 - 4796891 | 17070.5 |
| fusc family protein | EZ449_20500 | Not Available | Negative | 4796888 - 4799047 | 82709.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

