Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1398 domain-containing protein | EZ449_20405 | Not Available | Positive | 4778659 - 4779054 | 14812.4 |
| phosphorylase | EZ449_20410 | Not Available | Negative | 4779422 - 4780282 | 31597.1 |
| yigz family protein | EZ449_20415 | Not Available | Negative | 4780315 - 4780929 | 23141.9 |
| dmt family transporter | EZ449_20420 | Not Available | Negative | 4780919 - 4781779 | 31712.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EZ449_20425 | Not Available | Negative | 4781776 - 4782831 | 39635.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | EZ449_20430 | Not Available | Positive | 4782912 - 4783766 | 32182.9 |
| site-specific tyrosine recombinase xerd | EZ449_20435 | Not Available | Negative | 4783777 - 4784673 | 33620.2 |
| type ii 3-dehydroquinate dehydratase | EZ449_20440 | Not Available | Positive | 4784908 - 4785324 | 15221.3 |
| tlpa family protein disulfide reductase | EZ449_20445 | Not Available | Positive | 4785335 - 4786060 | 27280.8 |
| glycosyltransferase family 2 protein | EZ449_20450 | Not Available | Negative | 4786053 - 4787066 | 38684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

