Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EZ449_20355 | Not Available | Negative | 4767553 - 4768041 | 18907.9 |
| hsp20/alpha crystallin family protein | EZ449_20360 | Not Available | Positive | 4768111 - 4768545 | 16434.3 |
| nicotinamide mononucleotide adenylyltransferase | EZ449_20365 | Not Available | Positive | 4768728 - 4770044 | 49595.2 |
| Trna-pseudo | Not Available | Not Available | Positive | 4771575 - 4771649 | Not Available |
| dead/deah box helicase | EZ449_20375 | Not Available | Positive | 4772168 - 4773463 | 48536.9 |
| ompa family protein | EZ449_20380 | Not Available | Negative | 4773599 - 4774885 | 46141.2 |
| hypothetical protein | EZ449_20385 | Not Available | Negative | 4775107 - 4775772 | 25189.3 |
| trmh family rna methyltransferase | EZ449_20390 | Not Available | Negative | 4775782 - 4776312 | 19722.7 |
| galactokinase | EZ449_20395 | Not Available | Negative | 4776379 - 4777530 | 42544.5 |
| galactose mutarotase | EZ449_20400 | Not Available | Positive | 4777606 - 4778655 | 38788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

