Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolb protein precursor | EZ449_20250 | Not Available | Negative | 4743442 - 4746618 | 119011.0 |
| penicillin-binding protein | EZ449_20255 | Not Available | Negative | 4746784 - 4749225 | 93169.4 |
| polyphosphate kinase 2 family protein | EZ449_20260 | Not Available | Positive | 4749367 - 4750245 | 33844.5 |
| cytochrome c | EZ449_20270 | Not Available | Negative | 4750687 - 4751109 | 15683.0 |
| sco family protein | EZ449_20275 | Not Available | Negative | 4751228 - 4751878 | 24688.6 |
| hypothetical protein | EZ449_20280 | Not Available | Negative | 4752783 - 4753238 | 17517.5 |
| hypothetical protein | EZ449_20285 | Not Available | Negative | 4753250 - 4754227 | 36272.0 |
| cytochrome-c peroxidase | EZ449_20290 | Not Available | Negative | 4754190 - 4755170 | 36268.4 |
| hypothetical protein | EZ449_20295 | Not Available | Negative | 4755223 - 4755993 | 28187.5 |
| hypothetical protein | EZ449_20300 | Not Available | Negative | 4756272 - 4756556 | 10886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

