Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | EZ449_00085 | Not Available | Negative | 21873 - 22367 | 17918.8 |
| peptidylprolyl isomerase | EZ449_00090 | Not Available | Negative | 22474 - 22920 | 16283.7 |
| acyl-coa dehydrogenase | EZ449_00095 | Not Available | Negative | 23260 - 25050 | 65337.7 |
| acetyl-coa c-acyltransferase | EZ449_00100 | Not Available | Negative | 25225 - 26403 | 41761.6 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | EZ449_00105 | Not Available | Negative | 26592 - 29000 | 89234.7 |
| marr family transcriptional regulator | EZ449_00110 | Not Available | Negative | 29096 - 29530 | 16525.0 |
| gamma-glutamyltransferase | EZ449_00115 | Not Available | Negative | 29664 - 31385 | 61777.9 |
| long-chain fatty acid--coa ligase | EZ449_00120 | Not Available | Negative | 31357 - 33132 | 66234.0 |
| hypothetical protein | EZ449_00125 | Not Available | Positive | 33399 - 33872 | 17024.5 |
| m61 family peptidase | EZ449_00130 | Not Available | Negative | 33950 - 35782 | 67484.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

