Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_20200 | Not Available | Positive | 4734054 - 4735688 | 57949.1 |
| metallophosphoesterase | EZ449_20205 | Not Available | Positive | 4735825 - 4737234 | 53257.8 |
| glycerophosphodiester phosphodiesterase | EZ449_20210 | Not Available | Positive | 4737248 - 4738147 | 33858.3 |
| sialate o-acetylesterase | EZ449_20215 | Not Available | Positive | 4738176 - 4738868 | 26147.7 |
| dethiobiotin synthase | EZ449_20220 | Not Available | Negative | 4738860 - 4739468 | 22298.3 |
| pyridoxal phosphate-dependent aminotransferase family protein | EZ449_20225 | Not Available | Negative | 4739461 - 4740591 | 41763.8 |
| hypothetical protein | EZ449_20230 | Not Available | Negative | 4740665 - 4741120 | 16892.8 |
| lexa family transcriptional regulator | EZ449_20235 | Not Available | Negative | 4741198 - 4741974 | 29477.2 |
| giy-yig nuclease family protein | EZ449_20240 | Not Available | Positive | 4742108 - 4742458 | 13778.8 |
| subclass b3 metallo-beta-lactamase | EZ449_20245 | Not Available | Negative | 4742514 - 4743371 | 32364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

