Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_20145 | Not Available | Positive | 4718606 - 4719226 | 21865.3 |
| polyphosphate kinase 1 | EZ449_20150 | Not Available | Positive | 4719325 - 4721385 | 79508.0 |
| exopolyphosphatase | EZ449_20155 | Not Available | Positive | 4721385 - 4722266 | 33055.0 |
| hypothetical protein | EZ449_20160 | Not Available | Negative | 4722269 - 4722625 | 13832.8 |
| 6-phosphogluconolactonase | EZ449_20165 | Not Available | Negative | 4722634 - 4723359 | 27239.2 |
| glucose-6-phosphate dehydrogenase | EZ449_20170 | Not Available | Negative | 4723409 - 4724923 | 58027.1 |
| nadp-dependent phosphogluconate dehydrogenase | EZ449_20175 | Not Available | Negative | 4724954 - 4726375 | 52721.0 |
| rok family protein | EZ449_20180 | Not Available | Negative | 4726464 - 4727222 | 27944.6 |
| susc/raga family tonb-linked outer membrane protein | EZ449_20190 | Not Available | Positive | 4729108 - 4732434 | 121580.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ449_20195 | Not Available | Positive | 4732447 - 4734024 | 58817.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

