Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | EZ449_20095 | Not Available | Positive | 4706622 - 4707872 | 43910.3 |
| hamp domain-containing histidine kinase | EZ449_20100 | Not Available | Positive | 4708005 - 4709846 | 69917.6 |
| duf480 domain-containing protein | EZ449_20105 | Not Available | Negative | 4709850 - 4710500 | 24150.0 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EZ449_20110 | Not Available | Positive | 4710761 - 4711384 | 22438.9 |
| xanthine dehydrogenase family protein subunit m | EZ449_20115 | Not Available | Positive | 4711381 - 4712364 | 35461.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EZ449_20120 | Not Available | Positive | 4712367 - 4714496 | 76694.0 |
| peptidase s8 | EZ449_20125 | Not Available | Negative | 4714935 - 4716545 | 58876.4 |
| duf4142 domain-containing protein | EZ449_20130 | Not Available | Negative | 4716849 - 4717445 | 21398.7 |
| n-acetyltransferase | EZ449_20135 | Not Available | Negative | 4717505 - 4717954 | 17336.7 |
| yajq family cyclic di-gmp-binding protein | EZ449_20140 | Not Available | Negative | 4718039 - 4718530 | 18122.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

