Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | EZ449_20045 | Not Available | Positive | 4698522 - 4699103 | 22417.5 |
| duf983 domain-containing protein | EZ449_20050 | Not Available | Positive | 4699214 - 4699612 | 14808.4 |
| hypothetical protein | EZ449_20055 | Not Available | Negative | 4699641 - 4700165 | 19913.8 |
| copper homeostasis protein cutc | EZ449_20060 | Not Available | Negative | 4700671 - 4701486 | 29003.9 |
| glycosylasparaginase | EZ449_20065 | Not Available | Negative | 4701546 - 4702592 | 37514.1 |
| nitrilase family protein | EZ449_20070 | Not Available | Negative | 4702660 - 4703439 | 30362.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ449_20075 | Not Available | Negative | 4703485 - 4704630 | 42833.6 |
| tetr/acrr family transcriptional regulator | EZ449_20080 | Not Available | Positive | 4704967 - 4705554 | 21384.9 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_20085 | Not Available | Positive | 4705605 - 4706372 | 27782.5 |
| duf2798 domain-containing protein | EZ449_20090 | Not Available | Positive | 4706392 - 4706625 | 8716.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

