Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3667 domain-containing protein | EZ449_19890 | Not Available | Negative | 4664129 - 4664956 | 31534.0 |
| damage-inducible protein dinb | EZ449_19895 | Not Available | Positive | 4665839 - 4666369 | 19727.0 |
| abc transporter atp-binding protein | EZ449_19905 | Not Available | Positive | 4667119 - 4668951 | 68921.3 |
| hypothetical protein | EZ449_19910 | Not Available | Positive | 4669046 - 4670368 | 48143.9 |
| lysine transporter lyse | EZ449_19915 | Not Available | Negative | 4670773 - 4671426 | 24615.9 |
| excinuclease abc subunit uvra | EZ449_19920 | Not Available | Negative | 4671435 - 4674248 | 104342.0 |
| sigma-70 family rna polymerase sigma factor | EZ449_19925 | Not Available | Positive | 4674509 - 4675093 | 22890.7 |
| hypothetical protein | EZ449_19930 | Not Available | Positive | 4675182 - 4675376 | 7419.71 |
| mfs transporter | EZ449_19935 | Not Available | Positive | 4675577 - 4676776 | 42513.5 |
| hypothetical protein | EZ449_19940 | Not Available | Negative | 4676773 - 4677351 | 21545.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

