Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4639187 - 4639260 | Not Available |
| hypothetical protein | EZ449_19795 | Not Available | Negative | 4639444 - 4639650 | 7618.02 |
| chloramphenicol acetyltransferase | EZ449_19800 | Not Available | Negative | 4639685 - 4640332 | 24834.2 |
| had family hydrolase | EZ449_19805 | Not Available | Negative | 4640329 - 4641024 | 26523.3 |
| crp/fnr family transcriptional regulator | EZ449_19810 | Not Available | Positive | 4641103 - 4641711 | 23074.2 |
| hypothetical protein | EZ449_19815 | Not Available | Positive | 4642016 - 4642231 | 7800.53 |
| nadph-dependent oxidoreductase | EZ449_19820 | Not Available | Positive | 4642238 - 4642747 | 19634.4 |
| carbonic anhydrase | EZ449_19825 | Not Available | Positive | 4642795 - 4643421 | 23748.6 |
| sdr family oxidoreductase | EZ449_19830 | Not Available | Negative | 4643670 - 4644437 | 27167.6 |
| duf4861 domain-containing protein | EZ449_19835 | Not Available | Negative | 4644461 - 4645597 | 42446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

