Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | EZ449_19740 | Not Available | Negative | 4626536 - 4627135 | 23005.0 |
| hypothetical protein | EZ449_19745 | Not Available | Positive | 4627269 - 4627469 | 7074.36 |
| phosphonatase-like hydrolase | EZ449_19750 | Not Available | Negative | 4627936 - 4628643 | 25809.9 |
| hypothetical protein | EZ449_19755 | Not Available | Negative | 4628702 - 4629850 | 44601.7 |
| relaxase | EZ449_19760 | Not Available | Negative | 4629860 - 4631128 | 47394.2 |
| mobilization protein | EZ449_19765 | Not Available | Negative | 4631110 - 4631520 | 15986.5 |
| signal peptidase ii | EZ449_19770 | Not Available | Positive | 4632012 - 4632605 | 22439.9 |
| transglutaminase domain-containing protein | EZ449_19775 | Not Available | Positive | 4632688 - 4634571 | 72360.1 |
| duf3857 domain-containing protein | EZ449_19780 | Not Available | Positive | 4634574 - 4636802 | 85234.6 |
| hypothetical protein | EZ449_19785 | Not Available | Negative | 4637985 - 4639169 | 45919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

