Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph dehydrogenase nama | EZ449_01840 | Not Available | Negative | 435948 - 437027 | 39267.6 |
| aldo/keto reductase | EZ449_01845 | Not Available | Negative | 437128 - 438117 | 36462.3 |
| doxx family membrane protein | EZ449_01850 | Not Available | Negative | 438120 - 438518 | 14625.4 |
| abc transporter atp-binding protein | EZ449_01855 | Not Available | Positive | 438894 - 439721 | 30982.7 |
| hypothetical protein | EZ449_01860 | Not Available | Positive | 439726 - 440535 | 31199.7 |
| gntr family transcriptional regulator | EZ449_01865 | Not Available | Positive | 440552 - 440926 | 14685.8 |
| hypothetical protein | EZ449_01870 | Not Available | Positive | 440930 - 441778 | 31215.6 |
| alpha/beta hydrolase | EZ449_01875 | Not Available | Positive | 441908 - 442894 | 37072.1 |
| 2-hydroxyacid dehydrogenase | EZ449_01880 | Not Available | Negative | 442921 - 443922 | 36761.6 |
| ompa family protein | EZ449_01885 | Not Available | Positive | 444327 - 444857 | 19315.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

