Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | EZ449_19580 | Not Available | Negative | 4577667 - 4579052 | 51478.2 |
| hypothetical protein | EZ449_19585 | Not Available | Negative | 4579087 - 4580112 | 40221.4 |
| cupin-like domain-containing protein | EZ449_19590 | Not Available | Negative | 4580330 - 4581223 | 34209.6 |
| 4'-phosphopantetheinyl transferase superfamily protein | EZ449_19595 | Not Available | Negative | 4581186 - 4581914 | 27906.5 |
| non-ribosomal peptide synthetase | EZ449_19600 | Not Available | Negative | 4581907 - 4585977 | 151659.0 |
| amino acid adenylation domain-containing protein | EZ449_19605 | Not Available | Negative | 4585981 - 4592514 | 239638.0 |
| sdr family oxidoreductase | EZ449_19610 | Not Available | Negative | 4592807 - 4593823 | 38338.0 |
| udp-glucose/gdp-mannose dehydrogenase family protein | EZ449_19615 | Not Available | Negative | 4593845 - 4595188 | 49396.7 |
| glycosyltransferase family 2 protein | EZ449_19620 | Not Available | Negative | 4595356 - 4596522 | 44540.6 |
| glycosyltransferase family 2 protein | EZ449_19625 | Not Available | Negative | 4596655 - 4597572 | 34830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

