Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | EZ449_19530 | Not Available | Positive | 4566313 - 4567389 | 41052.2 |
| hypothetical protein | EZ449_19535 | Not Available | Positive | 4567415 - 4568092 | 25677.0 |
| lipopolysaccharide biosynthesis protein | EZ449_19540 | Not Available | Positive | 4568132 - 4570240 | 78916.5 |
| o-antigen ligase domain-containing protein | EZ449_19545 | Not Available | Positive | 4570261 - 4571541 | 46990.3 |
| hypothetical protein | EZ449_19550 | Not Available | Positive | 4571643 - 4572818 | 43860.8 |
| glycosyltransferase family 1 protein | EZ449_19555 | Not Available | Positive | 4572827 - 4574026 | 45662.9 |
| glycosyltransferase | EZ449_19560 | Not Available | Positive | 4574023 - 4574877 | 33455.6 |
| acyltransferase | EZ449_19565 | Not Available | Positive | 4574892 - 4575983 | 42110.7 |
| glycosyltransferase | EZ449_19570 | Not Available | Negative | 4575984 - 4576763 | 30410.4 |
| glycosyltransferase | EZ449_19575 | Not Available | Negative | 4576781 - 4577644 | 32710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

