Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EZ449_19480 | Not Available | Positive | 4555471 - 4556535 | 39645.5 |
| glycosyltransferase | EZ449_19485 | Not Available | Positive | 4556577 - 4557683 | 43051.8 |
| endo-1,4-beta-xylanase | EZ449_19490 | Not Available | Positive | 4557700 - 4558767 | 40362.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EZ449_19495 | Not Available | Negative | 4558777 - 4560705 | 70458.7 |
| hypothetical protein | EZ449_19500 | Not Available | Negative | 4560885 - 4561691 | 30321.8 |
| response regulator transcription factor | EZ449_19505 | Not Available | Positive | 4562037 - 4562690 | 24342.5 |
| hypothetical protein | EZ449_19510 | Not Available | Positive | 4562981 - 4563172 | 7241.91 |
| hypothetical protein | EZ449_19515 | Not Available | Positive | 4563287 - 4564885 | 59731.8 |
| serine acetyltransferase | EZ449_19520 | Not Available | Positive | 4565063 - 4565620 | 20279.0 |
| response regulator | EZ449_19525 | Not Available | Positive | 4565909 - 4566313 | 15292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

