Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | EZ449_19430 | Not Available | Negative | 4543434 - 4543910 | 18525.9 |
| hypothetical protein | EZ449_19435 | Not Available | Negative | 4544134 - 4544928 | 29863.6 |
| response regulator transcription factor | EZ449_19440 | Not Available | Positive | 4545299 - 4545946 | 23920.0 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | EZ449_19445 | Not Available | Positive | 4546081 - 4547490 | 53767.5 |
| polysaccharide export protein | EZ449_19450 | Not Available | Positive | 4547629 - 4548408 | 29065.8 |
| polysaccharide biosynthesis tyrosine autokinase | EZ449_19455 | Not Available | Positive | 4548415 - 4550781 | 88574.7 |
| o-antigen ligase domain-containing protein | EZ449_19460 | Not Available | Positive | 4550837 - 4552132 | 49386.7 |
| hypothetical protein | EZ449_19465 | Not Available | Positive | 4552122 - 4553603 | 56530.1 |
| serine acetyltransferase | EZ449_19470 | Not Available | Positive | 4553714 - 4554265 | 20418.2 |
| acyltransferase | EZ449_19475 | Not Available | Positive | 4554354 - 4555418 | 40675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

