Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_19380 | Not Available | Positive | 4530358 - 4530672 | 11004.4 |
| glycosyltransferase | EZ449_19385 | Not Available | Positive | 4530674 - 4531846 | 44161.7 |
| hypothetical protein | EZ449_19390 | Not Available | Positive | 4531843 - 4533039 | 46059.5 |
| hypothetical protein | EZ449_19395 | Not Available | Positive | 4533063 - 4534364 | 48537.6 |
| glycosyltransferase family 1 protein | EZ449_19400 | Not Available | Positive | 4534361 - 4535347 | 36781.6 |
| glycosyltransferase | EZ449_19405 | Not Available | Positive | 4535356 - 4536276 | 34375.2 |
| nad(p)-dependent oxidoreductase | EZ449_19410 | Not Available | Positive | 4536282 - 4537256 | 36321.0 |
| undecaprenyl-phosphate glucose phosphotransferase | EZ449_19415 | Not Available | Positive | 4537597 - 4538988 | 54052.4 |
| gliding motility protein remb | EZ449_19420 | Not Available | Positive | 4540683 - 4542311 | 61632.5 |
| exopolysaccharide biosynthesis protein | EZ449_19425 | Not Available | Negative | 4542952 - 4543434 | 18574.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

